STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PITPNM1Phosphatidylinositol transfer protein membrane associated 1. (1134 aa)    
Predicted Functional Partners:
VAPB
VAMP associated protein B and C.
    
 
 0.696
CDS1
CDP-diacylglycerol synthase 1.
     
 0.677
CABP4
Calcium binding protein 4.
    
 
 0.655
PPM1E
Protein phosphatase, Mg2+/Mn2+ dependent 1E.
   
  
 0.606
SLC25A27
Solute carrier family 25 member 27.
   
  
 0.604
TOR2A
Torsin family 2 member A.
    
 
 0.604
TMEM134
Transmembrane protein 134.
      
 0.603
RNF170
Ring finger protein 170.
      
 0.603
BTBD1
BTB domain containing 1.
   
  
 0.601
PTRH1
peptidyl-tRNA hydrolase 1 homolog.
      
 0.597
Your Current Organism:
Bison bison
NCBI taxonomy Id: 43346
Other names: B. bison bison, Bison bison bison, Bos bison bison
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.