STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MYO1HMyosin IH. (1037 aa)    
Predicted Functional Partners:
SMARCA5
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5.
    
 0.588
POLR1E
RNA polymerase I subunit E.
    
  0.578
BAZ1B
Bromodomain adjacent to zinc finger domain 1B.
    
  0.572
ENSBBBP00000006685
annotation not available
 
  
 0.567
DEK
DEK proto-oncogene.
     
 0.519
POLR1B
RNA polymerase I subunit B.
    
  0.512
ENSBBBP00000004681
annotation not available
     
 0.490
ENSBBBP00000020512
annotation not available
     
 0.490
ERCC6
ERCC excision repair 6, chromatin remodeling factor.
    
  0.482
GRXCR2
Glutaredoxin and cysteine rich domain containing 2.
     
 0.475
Your Current Organism:
Bison bison
NCBI taxonomy Id: 43346
Other names: B. bison bison, Bison bison bison, Bos bison bison
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.