STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSBBBP00000003420annotation not available (136 aa)    
Predicted Functional Partners:
HDAC3
Histone deacetylase 3.
   
 0.892
HDAC2
Histone deacetylase 2.
   
 0.892
HDAC1
Histone deacetylase 1.
   
 0.892
ENSBBBP00000016722
annotation not available
   
 0.878
HDAC4
Histone deacetylase 4.
   
 0.864
HDAC11
Histone deacetylase 11.
   
 0.864
ENSBBBP00000026162
annotation not available
   
 0.864
HDAC9
Histone deacetylase 9.
   
 0.857
VPS72
Vacuolar protein sorting 72 homolog.
    
 
 0.856
RUVBL1
RuvB like AAA ATPase 1.
   
 0.830
Your Current Organism:
Bison bison
NCBI taxonomy Id: 43346
Other names: B. bison bison, Bison bison bison, Bos bison bison
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.