STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BHLHE40Basic helix-loop-helix family member e40. (412 aa)    
Predicted Functional Partners:
ARNTL
Aryl hydrocarbon receptor nuclear translocator like.
    
 0.504
NR1D2
Nuclear receptor subfamily 1 group D member 2.
   
 
 0.453
PER2
Period circadian regulator 2.
   
 0.444
NFIL3
Nuclear factor, interleukin 3 regulated.
    
 0.438
CRY1
Cryptochrome circadian regulator 1.
   
 
 0.437
FANCC
FA complementation group C.
    
  0.429
FANCF
FA complementation group F.
    
  0.429
FANCG
FA complementation group G.
    
  0.429
FANCL
FA complementation group L.
    
  0.429
JUN
Jun proto-oncogene, AP-1 transcription factor subunit.
      
 0.422
Your Current Organism:
Bison bison
NCBI taxonomy Id: 43346
Other names: B. bison bison, Bison bison bison, Bos bison bison
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.