Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ENSBBBP00000006303 | ERN1 | ENSBBBP00000006303 | ENSBBBP00000005709 | annotation not available | Endoplasmic reticulum to nucleus signaling 1. | 0.775 |
ENSBBBP00000006303 | XBP1 | ENSBBBP00000006303 | ENSBBBP00000001520 | annotation not available | X-box binding protein 1. | 0.483 |
ERN1 | ENSBBBP00000006303 | ENSBBBP00000005709 | ENSBBBP00000006303 | Endoplasmic reticulum to nucleus signaling 1. | annotation not available | 0.775 |
ERN1 | FAS | ENSBBBP00000005709 | ENSBBBP00000003434 | Endoplasmic reticulum to nucleus signaling 1. | Fas cell surface death receptor. | 0.764 |
ERN1 | HSPA5 | ENSBBBP00000005709 | ENSBBBP00000006601 | Endoplasmic reticulum to nucleus signaling 1. | Heat shock protein family A (Hsp70) member 5. | 0.994 |
ERN1 | MAP3K5 | ENSBBBP00000005709 | ENSBBBP00000028624 | Endoplasmic reticulum to nucleus signaling 1. | Mitogen-activated protein kinase kinase kinase 5. | 0.977 |
ERN1 | PSEN1 | ENSBBBP00000005709 | ENSBBBP00000004416 | Endoplasmic reticulum to nucleus signaling 1. | Presenilin 1. | 0.951 |
ERN1 | PSEN2 | ENSBBBP00000005709 | ENSBBBP00000019025 | Endoplasmic reticulum to nucleus signaling 1. | Presenilin 2. | 0.948 |
ERN1 | SYVN1 | ENSBBBP00000005709 | ENSBBBP00000024293 | Endoplasmic reticulum to nucleus signaling 1. | Synoviolin 1. | 0.641 |
ERN1 | TRAF1 | ENSBBBP00000005709 | ENSBBBP00000024319 | Endoplasmic reticulum to nucleus signaling 1. | TNF receptor associated factor 1. | 0.686 |
ERN1 | TRAF2 | ENSBBBP00000005709 | ENSBBBP00000016573 | Endoplasmic reticulum to nucleus signaling 1. | TNF receptor associated factor 2. | 0.971 |
ERN1 | XBP1 | ENSBBBP00000005709 | ENSBBBP00000001520 | Endoplasmic reticulum to nucleus signaling 1. | X-box binding protein 1. | 0.902 |
FAS | ERN1 | ENSBBBP00000003434 | ENSBBBP00000005709 | Fas cell surface death receptor. | Endoplasmic reticulum to nucleus signaling 1. | 0.764 |
FAS | TRAF1 | ENSBBBP00000003434 | ENSBBBP00000024319 | Fas cell surface death receptor. | TNF receptor associated factor 1. | 0.516 |
FAS | TRAF2 | ENSBBBP00000003434 | ENSBBBP00000016573 | Fas cell surface death receptor. | TNF receptor associated factor 2. | 0.582 |
HSPA5 | ERN1 | ENSBBBP00000006601 | ENSBBBP00000005709 | Heat shock protein family A (Hsp70) member 5. | Endoplasmic reticulum to nucleus signaling 1. | 0.994 |
HSPA5 | SYVN1 | ENSBBBP00000006601 | ENSBBBP00000024293 | Heat shock protein family A (Hsp70) member 5. | Synoviolin 1. | 0.585 |
HSPA5 | XBP1 | ENSBBBP00000006601 | ENSBBBP00000001520 | Heat shock protein family A (Hsp70) member 5. | X-box binding protein 1. | 0.781 |
MAP3K5 | ERN1 | ENSBBBP00000028624 | ENSBBBP00000005709 | Mitogen-activated protein kinase kinase kinase 5. | Endoplasmic reticulum to nucleus signaling 1. | 0.977 |
MAP3K5 | TRAF1 | ENSBBBP00000028624 | ENSBBBP00000024319 | Mitogen-activated protein kinase kinase kinase 5. | TNF receptor associated factor 1. | 0.786 |
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