Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ADAM15 | TYRO3 | ENSBBBP00000005402 | ENSBBBP00000005770 | ADAM metallopeptidase domain 15. | TYRO3 protein tyrosine kinase. | 0.605 |
CD247 | FADD | ENSBBBP00000023803 | ENSBBBP00000003465 | CD247 molecule. | Fas associated via death domain. | 0.472 |
CD247 | TYRO3 | ENSBBBP00000023803 | ENSBBBP00000005770 | CD247 molecule. | TYRO3 protein tyrosine kinase. | 0.604 |
ENSBBBP00000011030 | ICAM3 | ENSBBBP00000011030 | ENSBBBP00000007451 | annotation not available | Intercellular adhesion molecule 3. | 0.938 |
ENSBBBP00000011030 | TYRO3 | ENSBBBP00000011030 | ENSBBBP00000005770 | annotation not available | TYRO3 protein tyrosine kinase. | 0.617 |
FADD | CD247 | ENSBBBP00000003465 | ENSBBBP00000023803 | Fas associated via death domain. | CD247 molecule. | 0.472 |
FADD | MIB2 | ENSBBBP00000003465 | ENSBBBP00000008920 | Fas associated via death domain. | Mindbomb E3 ubiquitin protein ligase 2. | 0.570 |
FADD | TAB1 | ENSBBBP00000003465 | ENSBBBP00000011441 | Fas associated via death domain. | TGF-beta activated kinase 1 (MAP3K7) binding protein 1. | 0.551 |
FADD | TRADD | ENSBBBP00000003465 | ENSBBBP00000006300 | Fas associated via death domain. | TNFRSF1A associated via death domain. | 0.998 |
FADD | TRAF6 | ENSBBBP00000003465 | ENSBBBP00000018551 | Fas associated via death domain. | TNF receptor associated factor 6. | 0.679 |
FADD | TYRO3 | ENSBBBP00000003465 | ENSBBBP00000005770 | Fas associated via death domain. | TYRO3 protein tyrosine kinase. | 0.521 |
ICAM3 | ENSBBBP00000011030 | ENSBBBP00000007451 | ENSBBBP00000011030 | Intercellular adhesion molecule 3. | annotation not available | 0.938 |
ICAM3 | TYRO3 | ENSBBBP00000007451 | ENSBBBP00000005770 | Intercellular adhesion molecule 3. | TYRO3 protein tyrosine kinase. | 0.495 |
MIB2 | FADD | ENSBBBP00000008920 | ENSBBBP00000003465 | Mindbomb E3 ubiquitin protein ligase 2. | Fas associated via death domain. | 0.570 |
MIB2 | TRAF6 | ENSBBBP00000008920 | ENSBBBP00000018551 | Mindbomb E3 ubiquitin protein ligase 2. | TNF receptor associated factor 6. | 0.632 |
MIB2 | TYRO3 | ENSBBBP00000008920 | ENSBBBP00000005770 | Mindbomb E3 ubiquitin protein ligase 2. | TYRO3 protein tyrosine kinase. | 0.570 |
PROS1 | TYRO3 | ENSBBBP00000007091 | ENSBBBP00000005770 | Protein S. | TYRO3 protein tyrosine kinase. | 0.820 |
TAB1 | FADD | ENSBBBP00000011441 | ENSBBBP00000003465 | TGF-beta activated kinase 1 (MAP3K7) binding protein 1. | Fas associated via death domain. | 0.551 |
TAB1 | TRADD | ENSBBBP00000011441 | ENSBBBP00000006300 | TGF-beta activated kinase 1 (MAP3K7) binding protein 1. | TNFRSF1A associated via death domain. | 0.931 |
TAB1 | TRAF6 | ENSBBBP00000011441 | ENSBBBP00000018551 | TGF-beta activated kinase 1 (MAP3K7) binding protein 1. | TNF receptor associated factor 6. | 0.998 |
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