Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ARID4B | RCOR3 | ENSBBBP00000018918 | ENSBBBP00000013562 | AT-rich interaction domain 4B. | REST corepressor 3. | 0.677 |
ARID4B | RSRC2 | ENSBBBP00000018918 | ENSBBBP00000009840 | AT-rich interaction domain 4B. | Arginine and serine rich coiled-coil 2. | 0.770 |
ENSBBBP00000027104 | PRKCSH | ENSBBBP00000027104 | ENSBBBP00000009850 | annotation not available | Protein kinase C substrate 80K-H. | 0.636 |
ENSBBBP00000027104 | RCOR3 | ENSBBBP00000027104 | ENSBBBP00000013562 | annotation not available | REST corepressor 3. | 0.645 |
ENSBBBP00000027104 | RSRC2 | ENSBBBP00000027104 | ENSBBBP00000009840 | annotation not available | Arginine and serine rich coiled-coil 2. | 0.707 |
PITPNM2 | RSRC2 | ENSBBBP00000023671 | ENSBBBP00000009840 | Phosphatidylinositol transfer protein membrane associated 2. | Arginine and serine rich coiled-coil 2. | 0.604 |
PRKCSH | ENSBBBP00000027104 | ENSBBBP00000009850 | ENSBBBP00000027104 | Protein kinase C substrate 80K-H. | annotation not available | 0.636 |
PRKCSH | RCOR3 | ENSBBBP00000009850 | ENSBBBP00000013562 | Protein kinase C substrate 80K-H. | REST corepressor 3. | 0.517 |
PRKCSH | RSRC2 | ENSBBBP00000009850 | ENSBBBP00000009840 | Protein kinase C substrate 80K-H. | Arginine and serine rich coiled-coil 2. | 0.684 |
RBM25 | RBM39 | ENSBBBP00000019808 | ENSBBBP00000008872 | RNA binding motif protein 25. | RNA binding motif protein 39. | 0.964 |
RBM25 | RSRC2 | ENSBBBP00000019808 | ENSBBBP00000009840 | RNA binding motif protein 25. | Arginine and serine rich coiled-coil 2. | 0.832 |
RBM25 | SRSF11 | ENSBBBP00000019808 | ENSBBBP00000003708 | RNA binding motif protein 25. | Serine and arginine rich splicing factor 11. | 0.872 |
RBM25 | YTHDC1 | ENSBBBP00000019808 | ENSBBBP00000028365 | RNA binding motif protein 25. | YTH domain containing 1. | 0.734 |
RBM39 | RBM25 | ENSBBBP00000008872 | ENSBBBP00000019808 | RNA binding motif protein 39. | RNA binding motif protein 25. | 0.964 |
RBM39 | RSRC2 | ENSBBBP00000008872 | ENSBBBP00000009840 | RNA binding motif protein 39. | Arginine and serine rich coiled-coil 2. | 0.784 |
RBM39 | SRSF11 | ENSBBBP00000008872 | ENSBBBP00000003708 | RNA binding motif protein 39. | Serine and arginine rich splicing factor 11. | 0.901 |
RBM39 | TRA2A | ENSBBBP00000008872 | ENSBBBP00000008043 | RNA binding motif protein 39. | Transformer 2 alpha homolog. | 0.418 |
RBM39 | YTHDC1 | ENSBBBP00000008872 | ENSBBBP00000028365 | RNA binding motif protein 39. | YTH domain containing 1. | 0.675 |
RCOR3 | ARID4B | ENSBBBP00000013562 | ENSBBBP00000018918 | REST corepressor 3. | AT-rich interaction domain 4B. | 0.677 |
RCOR3 | ENSBBBP00000027104 | ENSBBBP00000013562 | ENSBBBP00000027104 | REST corepressor 3. | annotation not available | 0.645 |
page 1 of 3