STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C12orf50Chromosome 12 open reading frame 50. (415 aa)    
Predicted Functional Partners:
C12orf29
Chromosome 12 open reading frame 29.
      
 0.701
SARNP
SAP domain containing ribonucleoprotein.
    
 0.681
ASH1L
ASH1 like histone lysine methyltransferase.
   
  
 0.679
POLDIP3
DNA polymerase delta interacting protein 3.
     
 0.627
TMTC3
Transmembrane O-mannosyltransferase targeting cadherins 3.
   
  
 0.618
USP34
Ubiquitin specific peptidase 34.
   
   0.607
THOC5
THO complex 5.
    
 0.588
PRPF4B
pre-mRNA processing factor 4B.
   
   0.587
ALYREF
Aly/REF export factor.
     
 0.571
THOC1
THO complex 1.
    
 0.564
Your Current Organism:
Bison bison
NCBI taxonomy Id: 43346
Other names: B. bison bison, Bison bison bison, Bos bison bison
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.