STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LITAFDLITAF domain containing. (71 aa)    
Predicted Functional Partners:
FANCM
FA complementation group M.
    
 0.840
ENSBBBP00000026271
annotation not available
  
  
0.798
ENSBBBP00000026276
annotation not available
     
 0.791
CARHSP1
Calcium regulated heat stable protein 1.
   
  
 0.618
RCBTB1
RCC1 and BTB domain containing protein 1.
      
 0.603
OR6N2
Olfactory receptor family 6 subfamily N member 2.
      
 0.603
OR6N1
Olfactory receptor family 6 subfamily N member 1.
      
 0.603
NUBPL
Nucleotide binding protein like.
      
 0.538
HNF4G
Hepatocyte nuclear factor 4 gamma.
   
 
 0.516
SETDB2
SET domain bifurcated histone lysine methyltransferase 2.
   
 0.507
Your Current Organism:
Bison bison
NCBI taxonomy Id: 43346
Other names: B. bison bison, Bison bison bison, Bos bison bison
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.