STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SNX30Sorting nexin family member 30. (443 aa)    
Predicted Functional Partners:
SNX4
Sorting nexin 4.
  
 
0.917
ENSBBBP00000007754
annotation not available
   
 0.849
ENSBBBP00000007766
annotation not available
   
 0.849
VPS35
VPS35 retromer complex component.
   
 
 0.735
VPS29
VPS29 retromer complex component.
   
 
 0.722
FKBP15
FKBP prolyl isomerase 15.
      
 0.705
ENSBBBP00000006427
annotation not available
   
 0.660
SNX6
Sorting nexin 6.
   
 0.660
ZFP37
ZFP37 zinc finger protein.
      
 0.659
VPS26A
VPS26, retromer complex component A.
   
 
 0.647
Your Current Organism:
Bison bison
NCBI taxonomy Id: 43346
Other names: B. bison bison, Bison bison bison, Bos bison bison
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.