ENSBBBP00000015494 protein (Bison bison) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSBBBP00000015494

annotation not available (103 aa)

Predicted Functional Partners:

H2BU1

0.722

HAT1

0.709

ARID4A

0.644

ARID4B

0.644

MYSM1

0.624

ENSBBBP00000015493

0.618

ENSBBBP00000015497

0.618

ENSBBBP00000015550

0.618

ENSBBBP00000017321

0.605

ENSBBBP00000026432

0.601

Your Current Organism:

Bison bison

NCBI taxonomy Id: 43346
Other names: B. bison bison, Bison bison bison, Bos bison bison

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ARID4A	ARID4B	ENSBBBP00000012314	ENSBBBP00000018918	AT-rich interaction domain 4A.	AT-rich interaction domain 4B.	0.543
ARID4A	ENSBBBP00000015493	ENSBBBP00000012314	ENSBBBP00000015493	AT-rich interaction domain 4A.	annotation not available	0.679
ARID4A	ENSBBBP00000015494	ENSBBBP00000012314	ENSBBBP00000015494	AT-rich interaction domain 4A.	annotation not available	0.644
ARID4A	ENSBBBP00000015497	ENSBBBP00000012314	ENSBBBP00000015497	AT-rich interaction domain 4A.	annotation not available	0.679
ARID4A	ENSBBBP00000015550	ENSBBBP00000012314	ENSBBBP00000015550	AT-rich interaction domain 4A.	annotation not available	0.679
ARID4A	ENSBBBP00000017321	ENSBBBP00000012314	ENSBBBP00000017321	AT-rich interaction domain 4A.	annotation not available	0.446
ARID4A	ENSBBBP00000026432	ENSBBBP00000012314	ENSBBBP00000026432	AT-rich interaction domain 4A.	annotation not available	0.425
ARID4A	MYSM1	ENSBBBP00000012314	ENSBBBP00000003295	AT-rich interaction domain 4A.	Myb like, SWIRM and MPN domains 1.	0.640
ARID4B	ARID4A	ENSBBBP00000018918	ENSBBBP00000012314	AT-rich interaction domain 4B.	AT-rich interaction domain 4A.	0.543
ARID4B	ENSBBBP00000015493	ENSBBBP00000018918	ENSBBBP00000015493	AT-rich interaction domain 4B.	annotation not available	0.679
ARID4B	ENSBBBP00000015494	ENSBBBP00000018918	ENSBBBP00000015494	AT-rich interaction domain 4B.	annotation not available	0.644
ARID4B	ENSBBBP00000015497	ENSBBBP00000018918	ENSBBBP00000015497	AT-rich interaction domain 4B.	annotation not available	0.679
ARID4B	ENSBBBP00000015550	ENSBBBP00000018918	ENSBBBP00000015550	AT-rich interaction domain 4B.	annotation not available	0.679
ARID4B	ENSBBBP00000026432	ENSBBBP00000018918	ENSBBBP00000026432	AT-rich interaction domain 4B.	annotation not available	0.425
ARID4B	MYSM1	ENSBBBP00000018918	ENSBBBP00000003295	AT-rich interaction domain 4B.	Myb like, SWIRM and MPN domains 1.	0.665
ENSBBBP00000015493	ARID4A	ENSBBBP00000015493	ENSBBBP00000012314	annotation not available	AT-rich interaction domain 4A.	0.679
ENSBBBP00000015493	ARID4B	ENSBBBP00000015493	ENSBBBP00000018918	annotation not available	AT-rich interaction domain 4B.	0.679
ENSBBBP00000015493	ENSBBBP00000015494	ENSBBBP00000015493	ENSBBBP00000015494	annotation not available	annotation not available	0.618
ENSBBBP00000015493	ENSBBBP00000017321	ENSBBBP00000015493	ENSBBBP00000017321	annotation not available	annotation not available	0.630
ENSBBBP00000015493	ENSBBBP00000026432	ENSBBBP00000015493	ENSBBBP00000026432	annotation not available	annotation not available	0.843