STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PCDHGA10Protocadherin gamma subfamily A, 10. (826 aa)    
Predicted Functional Partners:
WDR53
WD repeat domain 53.
      
 0.487
WDR54
WD repeat domain 54.
      
 0.444
OR4N5
Olfactory receptor 4N5.
      
 0.444
SH3BP5L
SH3 binding domain protein 5 like.
      
 0.426
TSC22D4
TSC22 domain family member 4.
      
 0.426
TBCD
Tubulin folding cofactor D.
      
 0.424
ENSBBBP00000007282
annotation not available
      
 0.422
ENSBBBP00000025871
annotation not available
      
 0.422
ZZEF1
Zinc finger ZZ-type and EF-hand domain containing 1.
      
 0.422
SPCS2
Signal peptidase complex subunit 2.
      
 0.420
Your Current Organism:
Bison bison
NCBI taxonomy Id: 43346
Other names: B. bison bison, Bison bison bison, Bos bison bison
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.