STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATXN2Ataxin 2. (1277 aa)    
Predicted Functional Partners:
ITPR1
Inositol 1,4,5-trisphosphate receptor type 1.
     
 0.965
ITPR2
Inositol 1,4,5-trisphosphate receptor type 2.
     
 0.953
ATXN2L
Ataxin 2 like.
    
0.951
LSM12
LSM12 homolog.
    
 0.941
ITPR3
Inositol 1,4,5-trisphosphate receptor type 3.
     
 0.904
DDX6
DEAD-box helicase 6.
    
 
 0.897
ENSBBBP00000004483
annotation not available
   
 
 0.820
ENSBBBP00000000601
annotation not available
     
 0.814
ENSBBBP00000010753
annotation not available
     
 0.814
ENSBBBP00000025645
annotation not available
     
 0.814
Your Current Organism:
Bison bison
NCBI taxonomy Id: 43346
Other names: B. bison bison, Bison bison bison, Bos bison bison
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.