STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LRMDALeucine rich melanocyte differentiation associated. (131 aa)    
Predicted Functional Partners:
ENSBBBP00000024841
annotation not available
   
 0.899
SF3A3
Splicing factor 3a subunit 3.
   
 0.892
SF3A1
Splicing factor 3a subunit 1.
   
 0.878
PHF5A
PHD finger protein 5A.
   
 0.873
SF3B3
Splicing factor 3b subunit 3.
    
 0.858
SF3B2
Splicing factor 3b subunit 2.
   
 0.857
DDX46
DEAD-box helicase 46.
    
 0.854
SF3A2
Splicing factor 3a subunit 2.
    
 0.850
SF3B5
Splicing factor 3b subunit 5.
   
 0.828
ENSBBBP00000010646
annotation not available
   
 0.815
Your Current Organism:
Bison bison
NCBI taxonomy Id: 43346
Other names: B. bison bison, Bison bison bison, Bos bison bison
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.