STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SNX10Sorting nexin 10. (200 aa)    
Predicted Functional Partners:
VPS35
VPS35 retromer complex component.
   
 0.916
VPS26A
VPS26, retromer complex component A.
    
 0.825
VPS26B
VPS26, retromer complex component B.
    
 0.825
VPS29
VPS29 retromer complex component.
   
 0.673
WLS
Wnt ligand secretion mediator.
    
 0.605
TRAFD1
TRAF-type zinc finger domain containing 1.
    
 
 0.602
SNX15
Sorting nexin 15.
     
 0.577
USP10
Ubiquitin specific peptidase 10.
    
 0.549
TCIRG1
T cell immune regulator 1, ATPase H+ transporting V0 subunit a3.
   
  
 0.529
OSTM1
Osteoclastogenesis associated transmembrane protein 1.
      
 0.503
Your Current Organism:
Bison bison
NCBI taxonomy Id: 43346
Other names: B. bison bison, Bison bison bison, Bos bison bison
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.