STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFHD1EF-hand domain family member D1. (239 aa)    
Predicted Functional Partners:
NMRAL1
NmrA like redox sensor 1.
    
 
 0.618
CAPZB
Capping actin protein of muscle Z-line subunit beta.
    
 0.547
SLC66A3
Solute carrier family 66 member 3.
      
 0.482
PEX11G
Peroxisomal biogenesis factor 11 gamma.
      
 0.482
TMEM98
Transmembrane protein 98.
      
 0.482
ERMN
Ermin.
      
 0.481
ENSBBBP00000025366
annotation not available
    
 
 0.445
SUGT1
SGT1 homolog, MIS12 kinetochore complex assembly cochaperone.
   
  
 0.443
ERGIC2
ERGIC and golgi 2.
   
  
 0.429
TXNDC8
Thioredoxin domain containing 8.
   
  
 0.426
Your Current Organism:
Bison bison
NCBI taxonomy Id: 43346
Other names: B. bison bison, Bison bison bison, Bos bison bison
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.