STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GJB5Gap junction protein beta 5. (273 aa)    
Predicted Functional Partners:
PPP5C
Protein phosphatase 5 catalytic subunit.
      
 0.657
TM4SF20
Transmembrane 4 L six family member 20.
      
 0.577
SFMBT1
Scm like with four mbt domains 1.
      
 0.511
TNS4
Tensin 4.
   
  
 0.504
GPA33
Glycoprotein A33.
      
 0.497
BTBD7
BTB domain containing 7.
      
 0.438
ENSBBBP00000012339
annotation not available
      
 0.433
NAA11
N(alpha)-acetyltransferase 11, NatA catalytic subunit.
      
 0.424
ENSBBBP00000023202
annotation not available
      
 0.422
PLLP
Plasmolipin.
      
 0.420
Your Current Organism:
Bison bison
NCBI taxonomy Id: 43346
Other names: B. bison bison, Bison bison bison, Bos bison bison
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.