STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104982988RNA-binding motif protein, X chromosome-like. (213 aa)    
Predicted Functional Partners:
HNRNPM
Heterogeneous nuclear ribonucleoprotein M.
   
 0.850
HNRNPK
Heterogeneous nuclear ribonucleoprotein K.
   
 0.845
ENSBBBP00000004300
annotation not available
   
 0.755
HNRNPU
Heterogeneous nuclear ribonucleoprotein U.
   
 0.749
HNRNPA1
Heterogeneous nuclear ribonucleoprotein A1.
   
 0.694
PCBP1
poly(rC) binding protein 1.
   
 0.614
ENSBBBP00000024360
annotation not available
   
  0.611
YTHDC2
YTH domain containing 2.
   
 0.593
ENSBBBP00000020455
annotation not available
   
 0.593
ZC3H6
Zinc finger CCCH-type containing 6.
  
 
 
 0.576
Your Current Organism:
Bison bison
NCBI taxonomy Id: 43346
Other names: B. bison bison, Bison bison bison, Bos bison bison
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.