Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CCN2 | COL1A1 | ENSBBBP00000012304 | ENSBBBP00000012899 | Cellular communication network factor 2. | Collagen type I alpha 1 chain. | 0.716 |
CCN2 | LOX | ENSBBBP00000012304 | ENSBBBP00000020421 | Cellular communication network factor 2. | Lysyl oxidase. | 0.464 |
CCN2 | LOXL2 | ENSBBBP00000012304 | ENSBBBP00000028690 | Cellular communication network factor 2. | Lysyl oxidase like 2. | 0.465 |
CCN2 | SERPINE1 | ENSBBBP00000012304 | ENSBBBP00000022721 | Cellular communication network factor 2. | Serpin family E member 1. | 0.618 |
COL1A1 | CCN2 | ENSBBBP00000012899 | ENSBBBP00000012304 | Collagen type I alpha 1 chain. | Cellular communication network factor 2. | 0.716 |
COL1A1 | COL5A2 | ENSBBBP00000012899 | ENSBBBP00000014717 | Collagen type I alpha 1 chain. | Collagen type V alpha 2 chain. | 0.921 |
COL1A1 | ELN | ENSBBBP00000012899 | ENSBBBP00000002941 | Collagen type I alpha 1 chain. | Elastin. | 0.558 |
COL1A1 | LOX | ENSBBBP00000012899 | ENSBBBP00000020421 | Collagen type I alpha 1 chain. | Lysyl oxidase. | 0.662 |
COL1A1 | LOXL2 | ENSBBBP00000012899 | ENSBBBP00000028690 | Collagen type I alpha 1 chain. | Lysyl oxidase like 2. | 0.586 |
COL1A1 | PLOD2 | ENSBBBP00000012899 | ENSBBBP00000009247 | Collagen type I alpha 1 chain. | Procollagen-lysine,2-oxoglutarate 5-dioxygenase 2. | 0.733 |
COL1A1 | SERPINE1 | ENSBBBP00000012899 | ENSBBBP00000022721 | Collagen type I alpha 1 chain. | Serpin family E member 1. | 0.524 |
COL5A2 | COL1A1 | ENSBBBP00000014717 | ENSBBBP00000012899 | Collagen type V alpha 2 chain. | Collagen type I alpha 1 chain. | 0.921 |
COL5A2 | LOX | ENSBBBP00000014717 | ENSBBBP00000020421 | Collagen type V alpha 2 chain. | Lysyl oxidase. | 0.516 |
COL5A2 | LOXL2 | ENSBBBP00000014717 | ENSBBBP00000028690 | Collagen type V alpha 2 chain. | Lysyl oxidase like 2. | 0.514 |
COL5A2 | PLOD2 | ENSBBBP00000014717 | ENSBBBP00000009247 | Collagen type V alpha 2 chain. | Procollagen-lysine,2-oxoglutarate 5-dioxygenase 2. | 0.644 |
ELN | COL1A1 | ENSBBBP00000002941 | ENSBBBP00000012899 | Elastin. | Collagen type I alpha 1 chain. | 0.558 |
ELN | LOX | ENSBBBP00000002941 | ENSBBBP00000020421 | Elastin. | Lysyl oxidase. | 0.890 |
ELN | LOXL2 | ENSBBBP00000002941 | ENSBBBP00000028690 | Elastin. | Lysyl oxidase like 2. | 0.713 |
ELN | LOXL3 | ENSBBBP00000002941 | ENSBBBP00000025568 | Elastin. | Lysyl oxidase like 3. | 0.657 |
ELN | LOXL4 | ENSBBBP00000002941 | ENSBBBP00000025168 | Elastin. | Lysyl oxidase like 4. | 0.676 |
page 1 of 3