Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AGXT2 | ALAS1 | ENSBBBP00000015073 | ENSBBBP00000007204 | Alanine--glyoxylate aminotransferase 2. | 5'-aminolevulinate synthase 1. | 0.948 |
AGXT2 | DAO | ENSBBBP00000015073 | ENSBBBP00000002502 | Alanine--glyoxylate aminotransferase 2. | D-amino acid oxidase. | 0.958 |
AGXT2 | ENSBBBP00000028726 | ENSBBBP00000015073 | ENSBBBP00000028726 | Alanine--glyoxylate aminotransferase 2. | annotation not available | 0.948 |
AGXT2 | GATM | ENSBBBP00000015073 | ENSBBBP00000010154 | Alanine--glyoxylate aminotransferase 2. | Glycine amidinotransferase. | 0.951 |
AGXT2 | GCAT | ENSBBBP00000015073 | ENSBBBP00000012391 | Alanine--glyoxylate aminotransferase 2. | Glycine C-acetyltransferase. | 0.954 |
AGXT2 | GLDC | ENSBBBP00000015073 | ENSBBBP00000025092 | Alanine--glyoxylate aminotransferase 2. | Glycine decarboxylase. | 0.965 |
AGXT2 | PIPOX | ENSBBBP00000015073 | ENSBBBP00000011465 | Alanine--glyoxylate aminotransferase 2. | Pipecolic acid and sarcosine oxidase. | 0.962 |
AGXT2 | SHMT1 | ENSBBBP00000015073 | ENSBBBP00000006438 | Alanine--glyoxylate aminotransferase 2. | Serine hydroxymethyltransferase 1. | 0.954 |
AGXT2 | SHMT2 | ENSBBBP00000015073 | ENSBBBP00000019165 | Alanine--glyoxylate aminotransferase 2. | Serine hydroxymethyltransferase 2. | 0.954 |
ALAD | ALAS1 | ENSBBBP00000001066 | ENSBBBP00000007204 | Aminolevulinate dehydratase. | 5'-aminolevulinate synthase 1. | 0.978 |
ALAD | ENSBBBP00000028726 | ENSBBBP00000001066 | ENSBBBP00000028726 | Aminolevulinate dehydratase. | annotation not available | 0.971 |
ALAD | GCAT | ENSBBBP00000001066 | ENSBBBP00000012391 | Aminolevulinate dehydratase. | Glycine C-acetyltransferase. | 0.734 |
ALAS1 | AGXT2 | ENSBBBP00000007204 | ENSBBBP00000015073 | 5'-aminolevulinate synthase 1. | Alanine--glyoxylate aminotransferase 2. | 0.948 |
ALAS1 | ALAD | ENSBBBP00000007204 | ENSBBBP00000001066 | 5'-aminolevulinate synthase 1. | Aminolevulinate dehydratase. | 0.978 |
ALAS1 | DAO | ENSBBBP00000007204 | ENSBBBP00000002502 | 5'-aminolevulinate synthase 1. | D-amino acid oxidase. | 0.949 |
ALAS1 | ENSBBBP00000028726 | ENSBBBP00000007204 | ENSBBBP00000028726 | 5'-aminolevulinate synthase 1. | annotation not available | 0.945 |
ALAS1 | GATM | ENSBBBP00000007204 | ENSBBBP00000010154 | 5'-aminolevulinate synthase 1. | Glycine amidinotransferase. | 0.946 |
ALAS1 | GCAT | ENSBBBP00000007204 | ENSBBBP00000012391 | 5'-aminolevulinate synthase 1. | Glycine C-acetyltransferase. | 0.948 |
ALAS1 | GLDC | ENSBBBP00000007204 | ENSBBBP00000025092 | 5'-aminolevulinate synthase 1. | Glycine decarboxylase. | 0.956 |
ALAS1 | PIPOX | ENSBBBP00000007204 | ENSBBBP00000011465 | 5'-aminolevulinate synthase 1. | Pipecolic acid and sarcosine oxidase. | 0.955 |
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