Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ORA41014.1ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (473 aa)    
Predicted Functional Partners:
ORA41013.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    
0.775
ORA41015.1
Cytochrome; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the cytochrome P450 family.
       0.773
ORA41016.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.773
ORA41012.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    
0.671
ORA32937.1
Pentachlorophenol monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.516
ORA32062.1
remO protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.508
ORA41011.1
TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.483
ORA40960.1
FAD-binding monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.443
BST20_04275
Hydroxyneurosporene methyltransferase; Incomplete; partial in the middle of a contig; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.443
ORA38883.1
FAD-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.443
Your Current Organism:
Mycobacterium branderi
NCBI taxonomy Id: 43348
Other names: ATCC 51789, CIP 104592, DSM 44624, JCM 12687, M. branderi, strain 52157
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