Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ORA38376.1 | ORA38925.1 | BST20_11285 | BST20_10265 | 2-oxoglutarate ferredoxin oxidoreductase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology. | acetyl-CoA carboxyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.881 |
ORA38376.1 | ORA40312.1 | BST20_11285 | BST20_07120 | 2-oxoglutarate ferredoxin oxidoreductase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology. | Cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.718 |
ORA38925.1 | ORA38376.1 | BST20_10265 | BST20_11285 | acetyl-CoA carboxyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 2-oxoglutarate ferredoxin oxidoreductase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.881 |
ORA38925.1 | ORA40312.1 | BST20_10265 | BST20_07120 | acetyl-CoA carboxyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.731 |
ORA40196.1 | ORA40312.1 | BST20_06400 | BST20_07120 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.513 |
ORA40312.1 | ORA38376.1 | BST20_07120 | BST20_11285 | Cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 2-oxoglutarate ferredoxin oxidoreductase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.718 |
ORA40312.1 | ORA38925.1 | BST20_07120 | BST20_10265 | Cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology. | acetyl-CoA carboxyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.731 |
ORA40312.1 | ORA40196.1 | BST20_07120 | BST20_06400 | Cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.513 |
ORA40312.1 | mhpB | BST20_07120 | BST20_24150 | Cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 3-(2,3-dihydroxyphenyl)propionate dioxygenase; Catalyzes the non-heme iron(II)-dependent oxidative cleavage of 2,3-dihydroxyphenylpropionic acid and 2,3-dihydroxicinnamic acid into 2-hydroxy-6-ketononadienedioate and 2-hydroxy-6- ketononatrienedioate, respectively; Belongs to the LigB/MhpB extradiol dioxygenase family. | 0.401 |
mhpB | ORA40312.1 | BST20_24150 | BST20_07120 | 3-(2,3-dihydroxyphenyl)propionate dioxygenase; Catalyzes the non-heme iron(II)-dependent oxidative cleavage of 2,3-dihydroxyphenylpropionic acid and 2,3-dihydroxicinnamic acid into 2-hydroxy-6-ketononadienedioate and 2-hydroxy-6- ketononatrienedioate, respectively; Belongs to the LigB/MhpB extradiol dioxygenase family. | Cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.401 |