STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ORA38838.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (232 aa)    
Predicted Functional Partners:
ORA38837.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  0.990
ORA34125.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.856
ORA39724.1
ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.842
ORA41170.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.838
ORA36835.1
Molybdate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.827
ORA39723.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.793
ORA35811.1
Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.793
ORA39722.1
Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.792
ORA35810.1
Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.792
ORA36182.1
Glutamate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.780
Your Current Organism:
Mycobacterium branderi
NCBI taxonomy Id: 43348
Other names: ATCC 51789, CIP 104592, DSM 44624, JCM 12687, M. branderi, strain 52157
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.