Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BST20_10365 | ORA36020.1 | BST20_10365 | BST20_15715 | Hypothetical protein; Internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.425 |
BST20_10365 | ORA40733.1 | BST20_10365 | BST20_00770 | Hypothetical protein; Internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology. | SAM-dependent methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.511 |
BST20_10365 | ORA40737.1 | BST20_10365 | BST20_00795 | Hypothetical protein; Internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology. | Transcriptional regulator; Indirectly regulates nitrogen metabolism; at high nitrogen levels P-II prevents the phosphorylation of NR-I, the transcriptional activator of the glutamine synthetase gene (glnA); at low nitrogen levels P-II is uridylylated to form PII-UMP and interacts with an adenylyltransferase (GlnE) that activates GlnA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.724 |
BST20_10365 | ORA41478.1 | BST20_10365 | BST20_05105 | Hypothetical protein; Internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.417 |
ORA36020.1 | BST20_10365 | BST20_15715 | BST20_10365 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.425 |
ORA36020.1 | ORA40733.1 | BST20_15715 | BST20_00770 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | SAM-dependent methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.491 |
ORA36020.1 | ORA41478.1 | BST20_15715 | BST20_05105 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.437 |
ORA40733.1 | BST20_10365 | BST20_00770 | BST20_10365 | SAM-dependent methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.511 |
ORA40733.1 | ORA36020.1 | BST20_00770 | BST20_15715 | SAM-dependent methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.491 |
ORA40737.1 | BST20_10365 | BST20_00795 | BST20_10365 | Transcriptional regulator; Indirectly regulates nitrogen metabolism; at high nitrogen levels P-II prevents the phosphorylation of NR-I, the transcriptional activator of the glutamine synthetase gene (glnA); at low nitrogen levels P-II is uridylylated to form PII-UMP and interacts with an adenylyltransferase (GlnE) that activates GlnA; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.724 |
ORA41478.1 | BST20_10365 | BST20_05105 | BST20_10365 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.417 |
ORA41478.1 | ORA36020.1 | BST20_05105 | BST20_15715 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.437 |