STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ORA37872.1Cholesterol oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (540 aa)    
Predicted Functional Partners:
ORA39479.1
Steroid C27-monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the cytochrome P450 family.
  
  
  0.858
ORA37926.1
Cholesterol oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 
0.824
ORA41272.1
Cholesterol oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 
0.822
ORA40821.1
DUF3298 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.818
ORA35438.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.818
ORA39586.1
Sulfotransferase family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.777
ORA32560.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
 0.777
ORA32247.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.777
ORA32215.1
Sulfotransferase family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.777
ORA35492.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.760
Your Current Organism:
Mycobacterium branderi
NCBI taxonomy Id: 43348
Other names: ATCC 51789, CIP 104592, DSM 44624, JCM 12687, M. branderi, strain 52157
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