STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ORA35755.1ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (520 aa)    
Predicted Functional Partners:
ORA35756.1
ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.994
ORA35757.1
TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.905
ORA36893.1
ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.826
ORA35754.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.825
ORA35103.1
Antibiotic ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.663
ORA34804.1
Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.653
ORA35102.1
Multidrug ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.589
ORA35758.1
Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.570
Your Current Organism:
Mycobacterium branderi
NCBI taxonomy Id: 43348
Other names: ATCC 51789, CIP 104592, DSM 44624, JCM 12687, M. branderi, strain 52157
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.