Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ORA35390.1XRE family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (114 aa)    
Predicted Functional Partners:
ORA35525.1
Integrase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.949
ORA35391.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.946
ORA31273.1
Integrase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the 'phage' integrase family.
 
   
 0.787
ORA40713.1
Integrase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.785
ORA40711.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.780
ORA31240.1
Recombinase XerD; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.780
ORA31252.1
Recombinase XerD; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.780
ORA31255.1
Exonuclease V subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.627
ORA33121.1
AAA family ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.573
ORA35389.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.502
Your Current Organism:
Mycobacterium branderi
NCBI taxonomy Id: 43348
Other names: ATCC 51789, CIP 104592, DSM 44624, JCM 12687, M. branderi, strain 52157
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.