Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
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[Homology]
Score
ORA33554.1Arabinosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (1091 aa)    
Predicted Functional Partners:
ORA33553.1
Arabinosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
0.999
ORA33563.1
Arabinofuranosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.949
ORA33629.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.895
ORA33546.1
Cutinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.819
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.
    
 
 0.794
ORA36139.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.775
ORA33566.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.770
ORA31159.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.764
ORA35164.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.756
lpqB
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.736
Your Current Organism:
Mycobacterium branderi
NCBI taxonomy Id: 43348
Other names: ATCC 51789, CIP 104592, DSM 44624, JCM 12687, M. branderi, strain 52157
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