Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ORA31383.1 | ORA31384.1 | BST20_26970 | BST20_26975 | SAM-dependent methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | FAD-linked oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.955 |
ORA31383.1 | ORA31385.1 | BST20_26970 | BST20_26980 | SAM-dependent methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Polyketide cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.784 |
ORA31383.1 | ORA37948.1 | BST20_26970 | BST20_12605 | SAM-dependent methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 3-oxoacyl-ACP reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.436 |
ORA31383.1 | ORA41213.1 | BST20_26970 | BST20_03565 | SAM-dependent methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | N-acyl-L-amino acid amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.457 |
ORA31383.1 | gcvP | BST20_26970 | BST20_14585 | SAM-dependent methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Ring-cleaving dioxygenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.726 |
ORA31383.1 | guaA | BST20_26970 | BST20_03895 | SAM-dependent methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Glutamine-hydrolyzing GMP synthase; Catalyzes the synthesis of GMP from XMP. | 0.425 |
ORA31384.1 | ORA31383.1 | BST20_26975 | BST20_26970 | FAD-linked oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | SAM-dependent methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.955 |
ORA31384.1 | ORA31385.1 | BST20_26975 | BST20_26980 | FAD-linked oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Polyketide cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.649 |
ORA31385.1 | ORA31383.1 | BST20_26980 | BST20_26970 | Polyketide cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology. | SAM-dependent methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.784 |
ORA31385.1 | ORA31384.1 | BST20_26980 | BST20_26975 | Polyketide cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology. | FAD-linked oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.649 |
ORA37948.1 | ORA31383.1 | BST20_12605 | BST20_26970 | 3-oxoacyl-ACP reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | SAM-dependent methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.436 |
ORA41213.1 | ORA31383.1 | BST20_03565 | BST20_26970 | N-acyl-L-amino acid amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | SAM-dependent methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.457 |
gcvP | ORA31383.1 | BST20_14585 | BST20_26970 | Ring-cleaving dioxygenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | SAM-dependent methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.726 |
gcvP | guaA | BST20_14585 | BST20_03895 | Ring-cleaving dioxygenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | Glutamine-hydrolyzing GMP synthase; Catalyzes the synthesis of GMP from XMP. | 0.823 |
guaA | ORA31383.1 | BST20_03895 | BST20_26970 | Glutamine-hydrolyzing GMP synthase; Catalyzes the synthesis of GMP from XMP. | SAM-dependent methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.425 |
guaA | gcvP | BST20_03895 | BST20_14585 | Glutamine-hydrolyzing GMP synthase; Catalyzes the synthesis of GMP from XMP. | Ring-cleaving dioxygenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.823 |