STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NRI_0032Multisubunit Na+/H+ antiporter, MnhB subunit; Identified by match to protein family HMM PF04039. (146 aa)    
Predicted Functional Partners:
NRI_0030
Monovalent cation/proton antiporter, MnhC/PhaC subunit family; Identified by match to protein family HMM PF00420.
 
 
 0.999
NRI_0034
Monovalent cation/proton antiporter, MnhG/PhaG subunit.
 
 
 0.999
NRI_0494
Conserved hypothetical protein.
 
 
 0.999
NRI_0684
Identified by match to protein family HMM PF00361.
 
 
 0.999
NRI_0033
Multisubunit Na+/H+ antiporter, MnhB subunit.
 
 
 0.998
NRI_0178
Multiple resistance and pH regulation protein F (MrpF / PhaF); Identified by match to protein family HMM PF04066.
  
 
 0.996
NRI_0536
Identified by match to protein family HMM PF00361.
 
 
 0.963
NRI_0013
NADH-quinone oxidoreductase chain l; Identified by match to protein family HMM PF00361; match to protein family HMM PF00662; match to protein family HMM TIGR01974.
  
 
 0.902
nuoI
NADH-quinone oxidoreductase subunit i; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.
  
 
 0.874
NRI_0031
Hypothetical protein; Identified by Glimmer2; putative.
       0.526
Your Current Organism:
Neorickettsia risticii
NCBI taxonomy Id: 434131
Other names: N. risticii str. Illinois, Neorickettsia risticii str. Illinois, Neorickettsia risticii strain Illinois
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