Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| NRI_0225 | ctrA | NRI_0225 | NRI_0226 | Hypothetical protein; Identified by Glimmer2; putative. | DNA-binding response regulator CtrA; Identified by match to protein family HMM PF00072; match to protein family HMM PF00486. | 0.419 |
| NRI_0225 | secA | NRI_0225 | NRI_0224 | Hypothetical protein; Identified by Glimmer2; putative. | Preprotein translocase, SecA subunit; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane. | 0.556 |
| ctrA | NRI_0225 | NRI_0226 | NRI_0225 | DNA-binding response regulator CtrA; Identified by match to protein family HMM PF00072; match to protein family HMM PF00486. | Hypothetical protein; Identified by Glimmer2; putative. | 0.419 |
| ctrA | secA | NRI_0226 | NRI_0224 | DNA-binding response regulator CtrA; Identified by match to protein family HMM PF00072; match to protein family HMM PF00486. | Preprotein translocase, SecA subunit; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane. | 0.459 |
| secA | NRI_0225 | NRI_0224 | NRI_0225 | Preprotein translocase, SecA subunit; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane. | Hypothetical protein; Identified by Glimmer2; putative. | 0.556 |
| secA | ctrA | NRI_0224 | NRI_0226 | Preprotein translocase, SecA subunit; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane. | DNA-binding response regulator CtrA; Identified by match to protein family HMM PF00072; match to protein family HMM PF00486. | 0.459 |