rplD protein (Neorickettsia risticii) - STRING interaction network

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Score

rplD

Ribosomal protein L4/L1 family; Forms part of the polypeptide exit tunnel. (214 aa)

Predicted Functional Partners:

rpsO

0.999

rplI

0.999

rpsR

0.999

rpsF

0.999

rpsP

0.999

efp

0.999

rpmI

0.999

rplT

0.999

rpmG

0.999

rpsJ

0.999

Your Current Organism:

Neorickettsia risticii

NCBI taxonomy Id: 434131
Other names: N. risticii str. Illinois, Neorickettsia risticii str. Illinois, Neorickettsia risticii strain Illinois

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
efp	rplD	NRI_0189	NRI_0258	Translation elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase.	Ribosomal protein L4/L1 family; Forms part of the polypeptide exit tunnel.	0.999
efp	rplI	NRI_0189	NRI_0060	Translation elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase.	Ribosomal protein L9; Binds to the 23S rRNA.	0.994
efp	rplT	NRI_0189	NRI_0207	Translation elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase.	Ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.	0.991
efp	rpmG	NRI_0189	NRI_0248	Translation elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase.	Ribosomal protein L33; Identified by match to protein family HMM PF00471; match to protein family HMM TIGR01023.	0.997
efp	rpmI	NRI_0189	NRI_0206	Translation elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase.	Conserved domain protein; Belongs to the bacterial ribosomal protein bL35 family.	0.993
efp	rpsF	NRI_0189	NRI_0062	Translation elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase.	Ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA.	0.994
efp	rpsJ	NRI_0189	NRI_0256	Translation elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase.	Ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.	0.999
efp	rpsO	NRI_0189	NRI_0058	Translation elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase.	Ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	0.999
efp	rpsP	NRI_0189	NRI_0124	Translation elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase.	Ribosomal protein S16; Identified by match to protein family HMM PF00886; match to protein family HMM TIGR00002; Belongs to the bacterial ribosomal protein bS16 family.	0.994
efp	rpsR	NRI_0189	NRI_0061	Translation elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase.	Conserved domain protein; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.	0.991
rplD	efp	NRI_0258	NRI_0189	Ribosomal protein L4/L1 family; Forms part of the polypeptide exit tunnel.	Translation elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase.	0.999
rplD	rplI	NRI_0258	NRI_0060	Ribosomal protein L4/L1 family; Forms part of the polypeptide exit tunnel.	Ribosomal protein L9; Binds to the 23S rRNA.	0.999
rplD	rplT	NRI_0258	NRI_0207	Ribosomal protein L4/L1 family; Forms part of the polypeptide exit tunnel.	Ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.	0.999
rplD	rpmG	NRI_0258	NRI_0248	Ribosomal protein L4/L1 family; Forms part of the polypeptide exit tunnel.	Ribosomal protein L33; Identified by match to protein family HMM PF00471; match to protein family HMM TIGR01023.	0.999
rplD	rpmI	NRI_0258	NRI_0206	Ribosomal protein L4/L1 family; Forms part of the polypeptide exit tunnel.	Conserved domain protein; Belongs to the bacterial ribosomal protein bL35 family.	0.999
rplD	rpsF	NRI_0258	NRI_0062	Ribosomal protein L4/L1 family; Forms part of the polypeptide exit tunnel.	Ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA.	0.999
rplD	rpsJ	NRI_0258	NRI_0256	Ribosomal protein L4/L1 family; Forms part of the polypeptide exit tunnel.	Ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.	0.999
rplD	rpsO	NRI_0258	NRI_0058	Ribosomal protein L4/L1 family; Forms part of the polypeptide exit tunnel.	Ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	0.999
rplD	rpsP	NRI_0258	NRI_0124	Ribosomal protein L4/L1 family; Forms part of the polypeptide exit tunnel.	Ribosomal protein S16; Identified by match to protein family HMM PF00886; match to protein family HMM TIGR00002; Belongs to the bacterial ribosomal protein bS16 family.	0.999
rplD	rpsR	NRI_0258	NRI_0061	Ribosomal protein L4/L1 family; Forms part of the polypeptide exit tunnel.	Conserved domain protein; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.	0.999