NRI_0367 protein (Neorickettsia risticii) - STRING interaction network

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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NRI_0367

Identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF04321; match to protein family HMM PF05368; match to protein family HMM PF07993. (311 aa)

Predicted Functional Partners:

metK

0.949

rpsC

0.947

NRI_0261

0.942

rpsH

0.941

rpsL

0.940

rpsN

0.937

rpsE

0.937

rplD

0.935

rpsB

0.931

rpsO

0.930

Your Current Organism:

Neorickettsia risticii

NCBI taxonomy Id: 434131
Other names: N. risticii str. Illinois, Neorickettsia risticii str. Illinois, Neorickettsia risticii strain Illinois

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
NRI_0261	NRI_0367	NRI_0261	NRI_0367	Ribosomal protein S19; Identified by match to protein family HMM PF00203; Belongs to the universal ribosomal protein uS19 family.	Identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF04321; match to protein family HMM PF05368; match to protein family HMM PF07993.	0.942
NRI_0261	rplD	NRI_0261	NRI_0258	Ribosomal protein S19; Identified by match to protein family HMM PF00203; Belongs to the universal ribosomal protein uS19 family.	Ribosomal protein L4/L1 family; Forms part of the polypeptide exit tunnel.	0.999
NRI_0261	rpsB	NRI_0261	NRI_0907	Ribosomal protein S19; Identified by match to protein family HMM PF00203; Belongs to the universal ribosomal protein uS19 family.	Ribosomal protein S2; Identified by match to protein family HMM PF00318; match to protein family HMM TIGR01011; Belongs to the universal ribosomal protein uS2 family.	0.997
NRI_0261	rpsC	NRI_0261	NRI_0263	Ribosomal protein S19; Identified by match to protein family HMM PF00203; Belongs to the universal ribosomal protein uS19 family.	Ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.	0.999
NRI_0261	rpsE	NRI_0261	NRI_0274	Ribosomal protein S19; Identified by match to protein family HMM PF00203; Belongs to the universal ribosomal protein uS19 family.	Ribosomal protein S5; Identified by match to protein family HMM PF00333; match to protein family HMM PF03719; match to protein family HMM TIGR01021; Belongs to the universal ribosomal protein uS5 family.	0.998
NRI_0261	rpsH	NRI_0261	NRI_0271	Ribosomal protein S19; Identified by match to protein family HMM PF00203; Belongs to the universal ribosomal protein uS19 family.	Ribosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family.	0.999
NRI_0261	rpsL	NRI_0261	NRI_0666	Ribosomal protein S19; Identified by match to protein family HMM PF00203; Belongs to the universal ribosomal protein uS19 family.	Ribosomal protein S12; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit.	0.998
NRI_0261	rpsN	NRI_0261	NRI_0270	Ribosomal protein S19; Identified by match to protein family HMM PF00203; Belongs to the universal ribosomal protein uS19 family.	Ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family.	0.999
NRI_0261	rpsO	NRI_0261	NRI_0058	Ribosomal protein S19; Identified by match to protein family HMM PF00203; Belongs to the universal ribosomal protein uS19 family.	Ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	0.996
NRI_0367	NRI_0261	NRI_0367	NRI_0261	Identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF04321; match to protein family HMM PF05368; match to protein family HMM PF07993.	Ribosomal protein S19; Identified by match to protein family HMM PF00203; Belongs to the universal ribosomal protein uS19 family.	0.942
NRI_0367	metK	NRI_0367	NRI_0461	Identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF04321; match to protein family HMM PF05368; match to protein family HMM PF07993.	Methionine adenosyltransferase; Identified by match to protein family HMM PF00438; match to protein family HMM PF02772; match to protein family HMM PF02773; match to protein family HMM TIGR01034; Belongs to the AdoMet synthase family.	0.949
NRI_0367	rplD	NRI_0367	NRI_0258	Identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF04321; match to protein family HMM PF05368; match to protein family HMM PF07993.	Ribosomal protein L4/L1 family; Forms part of the polypeptide exit tunnel.	0.935
NRI_0367	rpsB	NRI_0367	NRI_0907	Identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF04321; match to protein family HMM PF05368; match to protein family HMM PF07993.	Ribosomal protein S2; Identified by match to protein family HMM PF00318; match to protein family HMM TIGR01011; Belongs to the universal ribosomal protein uS2 family.	0.931
NRI_0367	rpsC	NRI_0367	NRI_0263	Identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF04321; match to protein family HMM PF05368; match to protein family HMM PF07993.	Ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.	0.947
NRI_0367	rpsE	NRI_0367	NRI_0274	Identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF04321; match to protein family HMM PF05368; match to protein family HMM PF07993.	Ribosomal protein S5; Identified by match to protein family HMM PF00333; match to protein family HMM PF03719; match to protein family HMM TIGR01021; Belongs to the universal ribosomal protein uS5 family.	0.937
NRI_0367	rpsH	NRI_0367	NRI_0271	Identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF04321; match to protein family HMM PF05368; match to protein family HMM PF07993.	Ribosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family.	0.941
NRI_0367	rpsL	NRI_0367	NRI_0666	Identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF04321; match to protein family HMM PF05368; match to protein family HMM PF07993.	Ribosomal protein S12; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit.	0.940
NRI_0367	rpsN	NRI_0367	NRI_0270	Identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF04321; match to protein family HMM PF05368; match to protein family HMM PF07993.	Ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family.	0.937
NRI_0367	rpsO	NRI_0367	NRI_0058	Identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF04321; match to protein family HMM PF05368; match to protein family HMM PF07993.	Ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	0.930
metK	NRI_0367	NRI_0461	NRI_0367	Methionine adenosyltransferase; Identified by match to protein family HMM PF00438; match to protein family HMM PF02772; match to protein family HMM PF02773; match to protein family HMM TIGR01034; Belongs to the AdoMet synthase family.	Identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF04321; match to protein family HMM PF05368; match to protein family HMM PF07993.	0.949

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