NRI_0393 protein (Neorickettsia risticii) - STRING interaction network

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second shell of interactors

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Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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Score

NRI_0393

HIT domain protein; Identified by match to protein family HMM PF01230. (115 aa)

Predicted Functional Partners:

rpoA

0.860

NRI_0037

0.820

rpoB

0.819

NRI_0653

0.697

NRI_0654

0.697

NRI_0391

0.572

NRI_0638

0.522

xth

0.447

NRI_0295

0.433

leuS

0.425

Your Current Organism:

Neorickettsia risticii

NCBI taxonomy Id: 434131
Other names: N. risticii str. Illinois, Neorickettsia risticii str. Illinois, Neorickettsia risticii strain Illinois

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
NRI_0037	NRI_0393	NRI_0037	NRI_0393	DNA-directed RNA polymerase, omega subunit.	HIT domain protein; Identified by match to protein family HMM PF01230.	0.820
NRI_0037	NRI_0653	NRI_0037	NRI_0653	DNA-directed RNA polymerase, omega subunit.	Bifunctional DNA-directed RNA polymerase, beta and beta' chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.988
NRI_0037	NRI_0654	NRI_0037	NRI_0654	DNA-directed RNA polymerase, omega subunit.	DNA-directed RNA polymerase beta' chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.988
NRI_0037	rpoA	NRI_0037	NRI_0280	DNA-directed RNA polymerase, omega subunit.	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
NRI_0037	rpoB	NRI_0037	NRI_0655	DNA-directed RNA polymerase, omega subunit.	DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
NRI_0037	xth	NRI_0037	NRI_0394	DNA-directed RNA polymerase, omega subunit.	Exodeoxyribonuclease III; Identified by match to protein family HMM PF03372; match to protein family HMM TIGR00195; match to protein family HMM TIGR00633.	0.499
NRI_0295	NRI_0393	NRI_0295	NRI_0393	Rrf2/aminotransferase, class V family protein; Identified by match to protein family HMM PF00266; match to protein family HMM PF01212; match to protein family HMM PF02082; match to protein family HMM TIGR00738.	HIT domain protein; Identified by match to protein family HMM PF01230.	0.433
NRI_0295	NRI_0638	NRI_0295	NRI_0638	Rrf2/aminotransferase, class V family protein; Identified by match to protein family HMM PF00266; match to protein family HMM PF01212; match to protein family HMM PF02082; match to protein family HMM TIGR00738.	Oxidoreductase, FAD-binding domain protein; Identified by match to protein family HMM PF00970.	0.684
NRI_0295	leuS	NRI_0295	NRI_0479	Rrf2/aminotransferase, class V family protein; Identified by match to protein family HMM PF00266; match to protein family HMM PF01212; match to protein family HMM PF02082; match to protein family HMM TIGR00738.	leucyl-tRNA synthetase; Identified by match to protein family HMM PF00133; match to protein family HMM PF09334; match to protein family HMM TIGR00396; Belongs to the class-I aminoacyl-tRNA synthetase family.	0.412
NRI_0295	rpoA	NRI_0295	NRI_0280	Rrf2/aminotransferase, class V family protein; Identified by match to protein family HMM PF00266; match to protein family HMM PF01212; match to protein family HMM PF02082; match to protein family HMM TIGR00738.	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.493
NRI_0391	NRI_0393	NRI_0391	NRI_0393	Hypothetical protein; Identified by Glimmer2; putative. Overlaps with tRNA-Met-2 gene (NRI_0392).	HIT domain protein; Identified by match to protein family HMM PF01230.	0.572
NRI_0393	NRI_0037	NRI_0393	NRI_0037	HIT domain protein; Identified by match to protein family HMM PF01230.	DNA-directed RNA polymerase, omega subunit.	0.820
NRI_0393	NRI_0295	NRI_0393	NRI_0295	HIT domain protein; Identified by match to protein family HMM PF01230.	Rrf2/aminotransferase, class V family protein; Identified by match to protein family HMM PF00266; match to protein family HMM PF01212; match to protein family HMM PF02082; match to protein family HMM TIGR00738.	0.433
NRI_0393	NRI_0391	NRI_0393	NRI_0391	HIT domain protein; Identified by match to protein family HMM PF01230.	Hypothetical protein; Identified by Glimmer2; putative. Overlaps with tRNA-Met-2 gene (NRI_0392).	0.572
NRI_0393	NRI_0638	NRI_0393	NRI_0638	HIT domain protein; Identified by match to protein family HMM PF01230.	Oxidoreductase, FAD-binding domain protein; Identified by match to protein family HMM PF00970.	0.522
NRI_0393	NRI_0653	NRI_0393	NRI_0653	HIT domain protein; Identified by match to protein family HMM PF01230.	Bifunctional DNA-directed RNA polymerase, beta and beta' chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.697
NRI_0393	NRI_0654	NRI_0393	NRI_0654	HIT domain protein; Identified by match to protein family HMM PF01230.	DNA-directed RNA polymerase beta' chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.697
NRI_0393	leuS	NRI_0393	NRI_0479	HIT domain protein; Identified by match to protein family HMM PF01230.	leucyl-tRNA synthetase; Identified by match to protein family HMM PF00133; match to protein family HMM PF09334; match to protein family HMM TIGR00396; Belongs to the class-I aminoacyl-tRNA synthetase family.	0.425
NRI_0393	rpoA	NRI_0393	NRI_0280	HIT domain protein; Identified by match to protein family HMM PF01230.	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.860
NRI_0393	rpoB	NRI_0393	NRI_0655	HIT domain protein; Identified by match to protein family HMM PF01230.	DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.819