NRI_0396 protein (Neorickettsia risticii) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

NRI_0396

Identified by match to protein family HMM PF00156. (269 aa)

Predicted Functional Partners:

NRI_0369

0.885

NRI_0310

0.835

NRI_0395

0.746

NRI_0068

0.643

NRI_0221

0.637

NRI_0222

0.637

NRI_0144

0.623

NRI_0423

0.623

recA

0.540

secF

0.529

Your Current Organism:

Neorickettsia risticii

NCBI taxonomy Id: 434131
Other names: N. risticii str. Illinois, Neorickettsia risticii str. Illinois, Neorickettsia risticii strain Illinois

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
NRI_0068	NRI_0310	NRI_0068	NRI_0310	Putative Mg chelatase-like protein; Identified by match to protein family HMM PF01078; match to protein family HMM TIGR00368.	Identified by match to protein family HMM PF03772; match to protein family HMM TIGR00360.	0.617
NRI_0068	NRI_0369	NRI_0068	NRI_0369	Putative Mg chelatase-like protein; Identified by match to protein family HMM PF01078; match to protein family HMM TIGR00368.	DNA processing chain A; Identified by match to protein family HMM PF02481; match to protein family HMM TIGR00732.	0.811
NRI_0068	NRI_0396	NRI_0068	NRI_0396	Putative Mg chelatase-like protein; Identified by match to protein family HMM PF01078; match to protein family HMM TIGR00368.	Identified by match to protein family HMM PF00156.	0.643
NRI_0144	NRI_0396	NRI_0144	NRI_0396	Tyrosine recombinase XerD; Identified by match to protein family HMM PF00589; match to protein family HMM PF02899; Belongs to the 'phage' integrase family.	Identified by match to protein family HMM PF00156.	0.623
NRI_0221	NRI_0222	NRI_0221	NRI_0222	DNA repair protein RadC, truncated; Identified by match to protein family HMM PF04002.	DNA repair protein RadC.	0.884
NRI_0221	NRI_0396	NRI_0221	NRI_0396	DNA repair protein RadC, truncated; Identified by match to protein family HMM PF04002.	Identified by match to protein family HMM PF00156.	0.637
NRI_0222	NRI_0221	NRI_0222	NRI_0221	DNA repair protein RadC.	DNA repair protein RadC, truncated; Identified by match to protein family HMM PF04002.	0.884
NRI_0222	NRI_0310	NRI_0222	NRI_0310	DNA repair protein RadC.	Identified by match to protein family HMM PF03772; match to protein family HMM TIGR00360.	0.428
NRI_0222	NRI_0396	NRI_0222	NRI_0396	DNA repair protein RadC.	Identified by match to protein family HMM PF00156.	0.637
NRI_0310	NRI_0068	NRI_0310	NRI_0068	Identified by match to protein family HMM PF03772; match to protein family HMM TIGR00360.	Putative Mg chelatase-like protein; Identified by match to protein family HMM PF01078; match to protein family HMM TIGR00368.	0.617
NRI_0310	NRI_0222	NRI_0310	NRI_0222	Identified by match to protein family HMM PF03772; match to protein family HMM TIGR00360.	DNA repair protein RadC.	0.428
NRI_0310	NRI_0369	NRI_0310	NRI_0369	Identified by match to protein family HMM PF03772; match to protein family HMM TIGR00360.	DNA processing chain A; Identified by match to protein family HMM PF02481; match to protein family HMM TIGR00732.	0.848
NRI_0310	NRI_0396	NRI_0310	NRI_0396	Identified by match to protein family HMM PF03772; match to protein family HMM TIGR00360.	Identified by match to protein family HMM PF00156.	0.835
NRI_0310	recA	NRI_0310	NRI_0507	Identified by match to protein family HMM PF03772; match to protein family HMM TIGR00360.	Protein RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.	0.561
NRI_0369	NRI_0068	NRI_0369	NRI_0068	DNA processing chain A; Identified by match to protein family HMM PF02481; match to protein family HMM TIGR00732.	Putative Mg chelatase-like protein; Identified by match to protein family HMM PF01078; match to protein family HMM TIGR00368.	0.811
NRI_0369	NRI_0310	NRI_0369	NRI_0310	DNA processing chain A; Identified by match to protein family HMM PF02481; match to protein family HMM TIGR00732.	Identified by match to protein family HMM PF03772; match to protein family HMM TIGR00360.	0.848
NRI_0369	NRI_0396	NRI_0369	NRI_0396	DNA processing chain A; Identified by match to protein family HMM PF02481; match to protein family HMM TIGR00732.	Identified by match to protein family HMM PF00156.	0.885
NRI_0369	recA	NRI_0369	NRI_0507	DNA processing chain A; Identified by match to protein family HMM PF02481; match to protein family HMM TIGR00732.	Protein RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.	0.699
NRI_0395	NRI_0396	NRI_0395	NRI_0396	Hypothetical protein; Identified by Glimmer2; putative.	Identified by match to protein family HMM PF00156.	0.746
NRI_0395	secF	NRI_0395	NRI_0397	Hypothetical protein; Identified by Glimmer2; putative.	Protein-export membrane protein SecF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.	0.436