STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NRI_0481Identified by match to protein family HMM PF01381; match to protein family HMM PF07022. (205 aa)    
Predicted Functional Partners:
NRI_0634
Acetyltransferase, gnat family; Identified by match to protein family HMM PF00583.
 
     0.773
NRI_0830
Type IV secretion system protein VirB6; Identified by match to protein family HMM PF04610.
  
     0.773
NRI_0828
Type IV secretion system protein, VirB6 family; Identified by match to protein family HMM PF04610.
  
     0.772
NRI_0829
Type IV secretion system protein, VirB6 family; Identified by match to protein family HMM PF04610.
  
     0.770
nrxR
Expression regulator NrxR.
  
     0.761
NRI_0809
Identified by match to protein family HMM PF02674.
  
     0.749
NRI_0519
RDD family protein; Identified by match to protein family HMM PF06271.
 
     0.719
NRI_0121
Membrane protein, putative.
  
     0.677
NRI_0176
Conserved hypothetical protein.
  
     0.640
NRI_0499
Conserved hypothetical protein.
 
     0.635
Your Current Organism:
Neorickettsia risticii
NCBI taxonomy Id: 434131
Other names: N. risticii str. Illinois, Neorickettsia risticii str. Illinois, Neorickettsia risticii strain Illinois
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.