NRI_0519 protein (Neorickettsia risticii) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

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Coexpression

Experiments

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[Homology]

Score

NRI_0519

RDD family protein; Identified by match to protein family HMM PF06271. (221 aa)

Predicted Functional Partners:

NRI_0520

0.887

NRI_0830

0.767

NRI_0829

0.763

NRI_0828

0.761

NRI_0481

0.719

NRI_0634

0.710

NRI_0832

0.675

NRI_0718

0.652

NRI_0809

0.651

NRI_0169

0.647

Your Current Organism:

Neorickettsia risticii

NCBI taxonomy Id: 434131
Other names: N. risticii str. Illinois, Neorickettsia risticii str. Illinois, Neorickettsia risticii strain Illinois

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
NRI_0169	NRI_0481	Auxin Efflux Carrier; Identified by match to protein family HMM PF03547.	Identified by match to protein family HMM PF01381; match to protein family HMM PF07022.	0.607
NRI_0169	NRI_0519	Auxin Efflux Carrier; Identified by match to protein family HMM PF03547.	RDD family protein; Identified by match to protein family HMM PF06271.	0.647
NRI_0169	NRI_0634	Auxin Efflux Carrier; Identified by match to protein family HMM PF03547.	Acetyltransferase, gnat family; Identified by match to protein family HMM PF00583.	0.717
NRI_0169	NRI_0718	Auxin Efflux Carrier; Identified by match to protein family HMM PF03547.	Type IV secretion system protein VirB8; Identified by match to protein family HMM PF04335.	0.707
NRI_0169	NRI_0809	Auxin Efflux Carrier; Identified by match to protein family HMM PF03547.	Identified by match to protein family HMM PF02674.	0.530
NRI_0169	NRI_0828	Auxin Efflux Carrier; Identified by match to protein family HMM PF03547.	Type IV secretion system protein, VirB6 family; Identified by match to protein family HMM PF04610.	0.669
NRI_0169	NRI_0829	Auxin Efflux Carrier; Identified by match to protein family HMM PF03547.	Type IV secretion system protein, VirB6 family; Identified by match to protein family HMM PF04610.	0.630
NRI_0169	NRI_0830	Auxin Efflux Carrier; Identified by match to protein family HMM PF03547.	Type IV secretion system protein VirB6; Identified by match to protein family HMM PF04610.	0.735
NRI_0169	NRI_0832	Auxin Efflux Carrier; Identified by match to protein family HMM PF03547.	Type IV secretion system protein VirB3; Identified by match to protein family HMM PF05101.	0.720
NRI_0481	NRI_0169	Identified by match to protein family HMM PF01381; match to protein family HMM PF07022.	Auxin Efflux Carrier; Identified by match to protein family HMM PF03547.	0.607
NRI_0481	NRI_0519	Identified by match to protein family HMM PF01381; match to protein family HMM PF07022.	RDD family protein; Identified by match to protein family HMM PF06271.	0.719
NRI_0481	NRI_0520	Identified by match to protein family HMM PF01381; match to protein family HMM PF07022.	Methyltransferase domain family; Identified by match to protein family HMM PF08241; match to protein family HMM PF08242.	0.488
NRI_0481	NRI_0634	Identified by match to protein family HMM PF01381; match to protein family HMM PF07022.	Acetyltransferase, gnat family; Identified by match to protein family HMM PF00583.	0.773
NRI_0481	NRI_0718	Identified by match to protein family HMM PF01381; match to protein family HMM PF07022.	Type IV secretion system protein VirB8; Identified by match to protein family HMM PF04335.	0.606
NRI_0481	NRI_0809	Identified by match to protein family HMM PF01381; match to protein family HMM PF07022.	Identified by match to protein family HMM PF02674.	0.749
NRI_0481	NRI_0828	Identified by match to protein family HMM PF01381; match to protein family HMM PF07022.	Type IV secretion system protein, VirB6 family; Identified by match to protein family HMM PF04610.	0.772
NRI_0481	NRI_0829	Identified by match to protein family HMM PF01381; match to protein family HMM PF07022.	Type IV secretion system protein, VirB6 family; Identified by match to protein family HMM PF04610.	0.770
NRI_0481	NRI_0830	Identified by match to protein family HMM PF01381; match to protein family HMM PF07022.	Type IV secretion system protein VirB6; Identified by match to protein family HMM PF04610.	0.773
NRI_0481	NRI_0832	Identified by match to protein family HMM PF01381; match to protein family HMM PF07022.	Type IV secretion system protein VirB3; Identified by match to protein family HMM PF05101.	0.553
NRI_0519	NRI_0169	RDD family protein; Identified by match to protein family HMM PF06271.	Auxin Efflux Carrier; Identified by match to protein family HMM PF03547.	0.647