STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NRI_0675Hypothetical protein; Identified by Glimmer2; putative. (43 aa)    
Predicted Functional Partners:
glnA
Glutamine synthetase, catalytic domain protein; Identified by match to protein family HMM PF00120; Belongs to the glutamine synthetase family.
       0.686
NRI_0676
ABC transporter permease protein; Identified by match to protein family HMM PF02405.
       0.571
NRI_0677
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
       0.571
NRI_0678
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
       0.571
NRI_0672
Hypothetical protein; Identified by Glimmer2; putative. Overlaps with tRNA-Thr-1 gene (NRI_0673).
       0.509
Your Current Organism:
Neorickettsia risticii
NCBI taxonomy Id: 434131
Other names: N. risticii str. Illinois, Neorickettsia risticii str. Illinois, Neorickettsia risticii strain Illinois
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.