NRI_0806 protein (Neorickettsia risticii) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

NRI_0806

Conserved hypothetical protein. (240 aa)

Predicted Functional Partners:

rpsI

0.668

rplM

0.668

NRI_0809

0.513

NRI_0810

0.513

Your Current Organism:

Neorickettsia risticii

NCBI taxonomy Id: 434131
Other names: N. risticii str. Illinois, Neorickettsia risticii str. Illinois, Neorickettsia risticii strain Illinois

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
NRI_0806	NRI_0809	NRI_0806	NRI_0809	Conserved hypothetical protein.	Identified by match to protein family HMM PF02674.	0.513
NRI_0806	NRI_0810	NRI_0806	NRI_0810	Conserved hypothetical protein.	Trap transporter, 4tm/12tm fusion protein; Identified by match to protein family HMM PF06808; match to protein family HMM TIGR02123.	0.513
NRI_0806	rplM	NRI_0806	NRI_0808	Conserved hypothetical protein.	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.668
NRI_0806	rpsI	NRI_0806	NRI_0807	Conserved hypothetical protein.	Ribosomal protein S9; Identified by match to protein family HMM PF00380; Belongs to the universal ribosomal protein uS9 family.	0.668
NRI_0809	NRI_0806	NRI_0809	NRI_0806	Identified by match to protein family HMM PF02674.	Conserved hypothetical protein.	0.513
NRI_0809	NRI_0810	NRI_0809	NRI_0810	Identified by match to protein family HMM PF02674.	Trap transporter, 4tm/12tm fusion protein; Identified by match to protein family HMM PF06808; match to protein family HMM TIGR02123.	0.831
NRI_0809	rplM	NRI_0809	NRI_0808	Identified by match to protein family HMM PF02674.	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.638
NRI_0809	rpsI	NRI_0809	NRI_0807	Identified by match to protein family HMM PF02674.	Ribosomal protein S9; Identified by match to protein family HMM PF00380; Belongs to the universal ribosomal protein uS9 family.	0.591
NRI_0810	NRI_0806	NRI_0810	NRI_0806	Trap transporter, 4tm/12tm fusion protein; Identified by match to protein family HMM PF06808; match to protein family HMM TIGR02123.	Conserved hypothetical protein.	0.513
NRI_0810	NRI_0809	NRI_0810	NRI_0809	Trap transporter, 4tm/12tm fusion protein; Identified by match to protein family HMM PF06808; match to protein family HMM TIGR02123.	Identified by match to protein family HMM PF02674.	0.831
NRI_0810	rplM	NRI_0810	NRI_0808	Trap transporter, 4tm/12tm fusion protein; Identified by match to protein family HMM PF06808; match to protein family HMM TIGR02123.	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.591
NRI_0810	rpsI	NRI_0810	NRI_0807	Trap transporter, 4tm/12tm fusion protein; Identified by match to protein family HMM PF06808; match to protein family HMM TIGR02123.	Ribosomal protein S9; Identified by match to protein family HMM PF00380; Belongs to the universal ribosomal protein uS9 family.	0.591
rplM	NRI_0806	NRI_0808	NRI_0806	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Conserved hypothetical protein.	0.668
rplM	NRI_0809	NRI_0808	NRI_0809	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Identified by match to protein family HMM PF02674.	0.638
rplM	NRI_0810	NRI_0808	NRI_0810	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Trap transporter, 4tm/12tm fusion protein; Identified by match to protein family HMM PF06808; match to protein family HMM TIGR02123.	0.591
rplM	rpsI	NRI_0808	NRI_0807	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Ribosomal protein S9; Identified by match to protein family HMM PF00380; Belongs to the universal ribosomal protein uS9 family.	0.999
rpsI	NRI_0806	NRI_0807	NRI_0806	Ribosomal protein S9; Identified by match to protein family HMM PF00380; Belongs to the universal ribosomal protein uS9 family.	Conserved hypothetical protein.	0.668
rpsI	NRI_0809	NRI_0807	NRI_0809	Ribosomal protein S9; Identified by match to protein family HMM PF00380; Belongs to the universal ribosomal protein uS9 family.	Identified by match to protein family HMM PF02674.	0.591
rpsI	NRI_0810	NRI_0807	NRI_0810	Ribosomal protein S9; Identified by match to protein family HMM PF00380; Belongs to the universal ribosomal protein uS9 family.	Trap transporter, 4tm/12tm fusion protein; Identified by match to protein family HMM PF06808; match to protein family HMM TIGR02123.	0.591
rpsI	rplM	NRI_0807	NRI_0808	Ribosomal protein S9; Identified by match to protein family HMM PF00380; Belongs to the universal ribosomal protein uS9 family.	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.999