ssa2 protein (Neorickettsia risticii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ssa2

50kDa strain-specific antigen. (512 aa)

Predicted Functional Partners:

ssa1

0.508

NRI_0579

0.497

cckA

0.478

Your Current Organism:

Neorickettsia risticii

NCBI taxonomy Id: 434131
Other names: N. risticii str. Illinois, Neorickettsia risticii str. Illinois, Neorickettsia risticii strain Illinois

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
NRI_0579	cckA	NRI_0579	NRI_0351	Conserved hypothetical protein.	Sensor histidine kinase/response regulator CckA; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF02518.	0.509
NRI_0579	ssa1	NRI_0579	NRI_0870	Conserved hypothetical protein.	50kDa strain-specific antigen.	0.497
NRI_0579	ssa2	NRI_0579	NRI_0871	Conserved hypothetical protein.	50kDa strain-specific antigen.	0.497
cckA	NRI_0579	NRI_0351	NRI_0579	Sensor histidine kinase/response regulator CckA; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF02518.	Conserved hypothetical protein.	0.509
cckA	ssa1	NRI_0351	NRI_0870	Sensor histidine kinase/response regulator CckA; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF02518.	50kDa strain-specific antigen.	0.478
cckA	ssa2	NRI_0351	NRI_0871	Sensor histidine kinase/response regulator CckA; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF02518.	50kDa strain-specific antigen.	0.478
ssa1	NRI_0579	NRI_0870	NRI_0579	50kDa strain-specific antigen.	Conserved hypothetical protein.	0.497
ssa1	cckA	NRI_0870	NRI_0351	50kDa strain-specific antigen.	Sensor histidine kinase/response regulator CckA; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF02518.	0.478
ssa1	ssa2	NRI_0870	NRI_0871	50kDa strain-specific antigen.	50kDa strain-specific antigen.	0.508
ssa2	NRI_0579	NRI_0871	NRI_0579	50kDa strain-specific antigen.	Conserved hypothetical protein.	0.497
ssa2	cckA	NRI_0871	NRI_0351	50kDa strain-specific antigen.	Sensor histidine kinase/response regulator CckA; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF02518.	0.478
ssa2	ssa1	NRI_0871	NRI_0870	50kDa strain-specific antigen.	50kDa strain-specific antigen.	0.508