STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NRI_0897Conserved hypothetical protein. (203 aa)    
Predicted Functional Partners:
NRI_0504
Identified by match to protein family HMM PF02470.
  
 0.972
NRI_0896
Putative VacJ lipoprotein; Identified by match to protein family HMM PF04333.
 
 
 
 0.936
NRI_0677
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
  
 
 0.911
NRI_0676
ABC transporter permease protein; Identified by match to protein family HMM PF02405.
  
 
 0.879
NRI_0857
Conserved hypothetical protein.
  
    0.784
NRI_0895
uracil-DNA glycosylase, family 4; Identified by match to protein family HMM PF03167; match to protein family HMM TIGR00758.
       0.774
NRI_0499
Conserved hypothetical protein.
  
     0.765
NRI_0829
Type IV secretion system protein, VirB6 family; Identified by match to protein family HMM PF04610.
  
     0.759
NRI_0022
Conserved hypothetical protein; Identified by match to protein family HMM PF00023.
 
     0.755
NRI_0176
Conserved hypothetical protein.
 
     0.751
Your Current Organism:
Neorickettsia risticii
NCBI taxonomy Id: 434131
Other names: N. risticii str. Illinois, Neorickettsia risticii str. Illinois, Neorickettsia risticii strain Illinois
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.