STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQS84353.1ATP synthase F1; Derived by automated computational analysis using gene prediction method: Protein Homology. (249 aa)    
Predicted Functional Partners:
AQS84351.1
RNA pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.
 
    0.877
AQS84352.1
Lipopolysaccharide biogenesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.810
AQS84350.1
AAA family ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.793
AQS86472.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.697
AQS86496.1
NADH dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.622
frr
Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family.
  
    0.599
AQS86348.1
Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.573
AQS86503.1
GcrA cell cycle regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.564
AQS86403.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.541
AQS86292.1
Multidrug transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.504
Your Current Organism:
Acetobacter aceti
NCBI taxonomy Id: 435
Other names: A. aceti, ATCC 15973, Acetimonas aceti, Acetobacter (subgen. Acetobacter) aceti, Acetobacter aceti aceti, Acetobacter aceti orleanensis, Acetobacter aceti subsp. aceti, Acetobacter aceti var. muciparum, Acetobacter ketogenum, Acetobacter lafarianum, Bacillus aceticus, Bacteriopsis aceti, Bacterium aceti, Bacterium acetigenoidum, Bacterium hansenianum, CCUG 18122, CIP 103111, DSM 3508, ICMP 8807, IFO 14818, JCM 7641, Micrococcus aceti, Mycoderma aceti souches non visqueuses (membraneuses), NBRC 14818, NCCB 23001, NCIB 8621, NCIB:8621, NCIMB 8621
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