STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BVU_0044Glycoside hydrolase family 16, candidate beta-glycosidase. (263 aa)    
Predicted Functional Partners:
BVU_1196
Glycoside hydrolase family 20; Related to beta-N-acetylhexosaminidases.
 
     0.558
BVU_2482
Acyltransferase.
 
   
 0.547
BVU_0045
Putative transposase.
       0.494
BVU_3951
Putative protein involved in capsular polysaccharide biosynthesis.
  
     0.484
BVU_2763
Conserved hypothetical protein.
  
     0.469
BVU_0949
Conserved hypothetical protein.
 
   
 0.467
BVU_0556
Glycoside hydrolase family 3, candidate beta-glycosidase.
  
 0.461
BVU_2198
Conserved hypothetical protein.
 
     0.458
BVU_0614
Conserved hypothetical protein.
 
     0.449
glaB1
Conserved hypothetical protein, possible ATP/GTP-binding site; Alpha-galactosidase. Removes both branched alpha-1,3-linked galactose residues of blood group B antigens and linear alpha-1,3- linked galactose structures.
  
  
 0.448
Your Current Organism:
Bacteroides vulgatus
NCBI taxonomy Id: 435590
Other names: B. vulgatus ATCC 8482, Bacteroides vulgatus ATCC 8482, Bacteroides vulgatus str. ATCC 8482, Bacteroides vulgatus strain ATCC 8482
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.