STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BVU_0114Putative regulatory protein. (120 aa)    
Predicted Functional Partners:
BVU_0113
Conserved hypothetical protein.
 
  
 0.943
BVU_0265
TonB.
 
  
 0.808
BVU_0112
Conserved hypothetical protein.
 
    0.730
BVU_0111
Putative thiol:disulfide interchange protein.
       0.588
BVU_0110
Putative thiol:disulfide interchange protein DsbE.
       0.539
BVU_0115
Glycoside hydrolase family 88, candidate delta-4,5 unsaturated glucuronyl hydrolase.
       0.439
BVU_2559
Conserved hypothetical protein, putative TonB.
 
  
 0.428
BVU_0116
Glycoside hydrolase family 43, candidate beta-xylosidase/alpha-L-arabinofuranosidase; Belongs to the glycosyl hydrolase 43 family.
       0.420
BVU_0461
Conserved hypothetical protein.
  
   
 0.415
BVU_0107
Putative outer membrane protein, probably involved in nutrient binding.
 
     0.400
Your Current Organism:
Bacteroides vulgatus
NCBI taxonomy Id: 435590
Other names: B. vulgatus ATCC 8482, Bacteroides vulgatus ATCC 8482, Bacteroides vulgatus str. ATCC 8482, Bacteroides vulgatus strain ATCC 8482
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.