STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BVU_0234Putative periplasmic protein. (331 aa)    
Predicted Functional Partners:
BVU_0235
Putative periplasmic protein.
 
    0.950
BVU_0233
Alginate O-acetylation protein; Belongs to the membrane-bound acyltransferase family.
    0.948
BVU_1013
Hypothetical protein.
  
 
 0.787
BVU_1019
Acyl carrier protein.
  
 
 0.787
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.
  
 
 0.787
BVU_0145
Glycoside hydrolase family 3, candidate beta-glycosidase.
  
  
 0.610
BVU_1178
Conserved hypothetical protein.
 
   
 0.561
BVU_3871
Conserved hypothetical protein.
 
 
 
 0.551
BVU_0236
Conserved hypothetical protein.
  
    0.548
BVU_1765
Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.
  
  
 0.534
Your Current Organism:
Bacteroides vulgatus
NCBI taxonomy Id: 435590
Other names: B. vulgatus ATCC 8482, Bacteroides vulgatus ATCC 8482, Bacteroides vulgatus str. ATCC 8482, Bacteroides vulgatus strain ATCC 8482
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.