STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BVU_0236Conserved hypothetical protein. (97 aa)    
Predicted Functional Partners:
BVU_4002
Ammonium transporter.
  
 
 0.955
BVU_0238
Putative membrane fusion protein transporter; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
     0.912
BVU_0239
Putative outer membrane efflux protein.
 
    0.898
argB
Putative acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily.
    
 
 0.866
BVU_0237
Putative cation efflux transporter; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
     0.803
BVU_4007
Glutamate synthase, large subunit.
  
  
 0.753
BVU_0240
Putative transcriptional regulator.
 
   
 0.689
BVU_2569
Conserved hypothetical protein.
  
 
 
 0.661
BVU_0235
Putative periplasmic protein.
 
     0.653
BVU_3295
Putative universal stress protein UspA.
  
  
 0.638
Your Current Organism:
Bacteroides vulgatus
NCBI taxonomy Id: 435590
Other names: B. vulgatus ATCC 8482, Bacteroides vulgatus ATCC 8482, Bacteroides vulgatus str. ATCC 8482, Bacteroides vulgatus strain ATCC 8482
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.