STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BVU_0251NAD-specific glutamate dehydrogenase 1; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. (445 aa)    
Predicted Functional Partners:
BVU_4007
Glutamate synthase, large subunit.
  
 0.999
BVU_3604
Putative proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydraogenase; Belongs to the aldehyde dehydrogenase family.
  
 0.950
BVU_3640
Putative NADPH-dependent glutamate synthase.
  
 0.944
BVU_4008
Glutamate synthase, small subunit.
  
 0.944
BVU_2272
Putative amidohydrolase.
   
 
 0.923
BVU_3530
Glutamine synthetase I.
  
 
 0.918
BVU_3895
Glutamate decarboxylase; Belongs to the group II decarboxylase family.
   
 
 0.915
hcp
Prismane protein; Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O.
     
 0.911
BVU_0144
Aspartate aminotransferase.
  
 
 0.910
BVU_3865
Aspartate aminotransferase.
  
 
 0.910
Your Current Organism:
Bacteroides vulgatus
NCBI taxonomy Id: 435590
Other names: B. vulgatus ATCC 8482, Bacteroides vulgatus ATCC 8482, Bacteroides vulgatus str. ATCC 8482, Bacteroides vulgatus strain ATCC 8482
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