STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BVU_0328acyl-CoA dehydrogenase. (568 aa)    
Predicted Functional Partners:
BVU_0325
Electron transfer flavoprotein beta-subunit.
 
 
 0.997
BVU_0326
Electron transfer flavoprotein alpha-subunit.
 
 0.997
nuoC
NADH dehydrogenase I, chain D; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient (By similarity); In the N-terminal section; belongs to the complex I 30 kDa subunit family.
  
 0.991
BVU_3775
Conserved hypothetical protein.
  
 0.824
BVU_3787
Pyruvate-flavodoxin oxidoreductase.
  
 0.806
BVU_2737
Serine protease precursor.
   
 0.776
BVU_3027
Putative long-chain-fatty-acid-CoA ligase.
 
 0.719
BVU_0009
Putative long-chain-fatty-acid-CoA ligase.
 
 0.718
BVU_3870
Putative long-chain-fatty-acid--CoA ligase.
 
 0.718
BVU_1484
Putative long-chain-fatty-acid--CoA ligase.
  
 0.681
Your Current Organism:
Bacteroides vulgatus
NCBI taxonomy Id: 435590
Other names: B. vulgatus ATCC 8482, Bacteroides vulgatus ATCC 8482, Bacteroides vulgatus str. ATCC 8482, Bacteroides vulgatus strain ATCC 8482
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