STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BVU_0390Putative outer membrane protein, probably involved in nutrient binding. (513 aa)    
Predicted Functional Partners:
BVU_0389
Putative outer membrane protein, probably involved in nutrient binding.
 
    0.942
BVU_3706
Putative outer membrane protein, probably involved in nutrient binding.
 
 
   0.799
BVU_1843
Putative outer membrane protein, probably involved in nutrient binding.
 
 
   0.793
BVU_1854
Putative outer membrane protein, probably involved in nutrient binding.
 
 
   0.777
BVU_0585
Putative outer membrane protein, probably involved in nutrient binding.
 
 
   0.774
BVU_0107
Putative outer membrane protein, probably involved in nutrient binding.
 
     0.771
BVU_1855
Putative outer membrane protein, probably involved in nutrient binding.
  
 
   0.770
BVU_1503
Conserved hypothetical protein.
 
 
 0.766
BVU_1844
Putative outer membrane protein, probably involved in nutrient binding.
  
 
   0.764
BVU_0505
Putative outer membrane protein, probably involved in nutrient binding.
 
 
   0.761
Your Current Organism:
Bacteroides vulgatus
NCBI taxonomy Id: 435590
Other names: B. vulgatus ATCC 8482, Bacteroides vulgatus ATCC 8482, Bacteroides vulgatus str. ATCC 8482, Bacteroides vulgatus strain ATCC 8482
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.