Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
BVU_0023 | BVU_0127 | RNA polymerase ECF-type sigma factor; Belongs to the sigma-70 factor family. ECF subfamily. | RNA polymerase ECF-type sigma factor; Belongs to the sigma-70 factor family. ECF subfamily. | 0.671 |
BVU_0023 | BVU_0501 | RNA polymerase ECF-type sigma factor; Belongs to the sigma-70 factor family. ECF subfamily. | Putative anti-sigma factor. | 0.753 |
BVU_0127 | BVU_0023 | RNA polymerase ECF-type sigma factor; Belongs to the sigma-70 factor family. ECF subfamily. | RNA polymerase ECF-type sigma factor; Belongs to the sigma-70 factor family. ECF subfamily. | 0.671 |
BVU_0127 | BVU_0501 | RNA polymerase ECF-type sigma factor; Belongs to the sigma-70 factor family. ECF subfamily. | Putative anti-sigma factor. | 0.759 |
BVU_0127 | BVU_0627 | RNA polymerase ECF-type sigma factor; Belongs to the sigma-70 factor family. ECF subfamily. | RNA polymerase ECF-type sigma factor; Belongs to the sigma-70 factor family. ECF subfamily. | 0.631 |
BVU_0127 | BVU_1053 | RNA polymerase ECF-type sigma factor; Belongs to the sigma-70 factor family. ECF subfamily. | RNA polymerase ECF-type sigma factor; Belongs to the sigma-70 factor family. ECF subfamily. | 0.565 |
BVU_0127 | BVU_1056 | RNA polymerase ECF-type sigma factor; Belongs to the sigma-70 factor family. ECF subfamily. | RNA polymerase ECF-type sigma factor; Belongs to the sigma-70 factor family. ECF subfamily. | 0.430 |
BVU_0127 | BVU_1804 | RNA polymerase ECF-type sigma factor; Belongs to the sigma-70 factor family. ECF subfamily. | Putative RNA polymerase ECF-type sigma factor; Belongs to the sigma-70 factor family. ECF subfamily. | 0.486 |
BVU_0127 | BVU_2211 | RNA polymerase ECF-type sigma factor; Belongs to the sigma-70 factor family. ECF subfamily. | Putative RNA polymerase ECF-type sigma factor; Belongs to the sigma-70 factor family. ECF subfamily. | 0.596 |
BVU_0306 | BVU_0501 | Putative RNA polymerase ECF-type sigma factor; Belongs to the sigma-70 factor family. ECF subfamily. | Putative anti-sigma factor. | 0.659 |
BVU_0501 | BVU_0023 | Putative anti-sigma factor. | RNA polymerase ECF-type sigma factor; Belongs to the sigma-70 factor family. ECF subfamily. | 0.753 |
BVU_0501 | BVU_0127 | Putative anti-sigma factor. | RNA polymerase ECF-type sigma factor; Belongs to the sigma-70 factor family. ECF subfamily. | 0.759 |
BVU_0501 | BVU_0306 | Putative anti-sigma factor. | Putative RNA polymerase ECF-type sigma factor; Belongs to the sigma-70 factor family. ECF subfamily. | 0.659 |
BVU_0501 | BVU_0502 | Putative anti-sigma factor. | Putative RNA polymerase ECF-type sigma factor; Belongs to the sigma-70 factor family. ECF subfamily. | 0.877 |
BVU_0501 | BVU_0627 | Putative anti-sigma factor. | RNA polymerase ECF-type sigma factor; Belongs to the sigma-70 factor family. ECF subfamily. | 0.681 |
BVU_0501 | BVU_1053 | Putative anti-sigma factor. | RNA polymerase ECF-type sigma factor; Belongs to the sigma-70 factor family. ECF subfamily. | 0.678 |
BVU_0501 | BVU_1056 | Putative anti-sigma factor. | RNA polymerase ECF-type sigma factor; Belongs to the sigma-70 factor family. ECF subfamily. | 0.767 |
BVU_0501 | BVU_1779 | Putative anti-sigma factor. | Putative ECF-type RNA polymerase sigma factor; Belongs to the sigma-70 factor family. ECF subfamily. | 0.790 |
BVU_0501 | BVU_1804 | Putative anti-sigma factor. | Putative RNA polymerase ECF-type sigma factor; Belongs to the sigma-70 factor family. ECF subfamily. | 0.755 |
BVU_0501 | BVU_2211 | Putative anti-sigma factor. | Putative RNA polymerase ECF-type sigma factor; Belongs to the sigma-70 factor family. ECF subfamily. | 0.785 |
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